Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 AL583810.1-201ENST00000553344 1045 ntBASIC22.69■■□□□ 1.22
HFM1A2PYH4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 REXO1L2P-201ENST00000425429 2069 ntBASIC22.69■■□□□ 1.22
HFM1A2PYH4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC22.69■■□□□ 1.22
HFM1A2PYH4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
HFM1A2PYH4 PAUPAR-201ENST00000630360 2965 ntBASIC22.69■■□□□ 1.22
HFM1A2PYH4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 FAM86MP-201ENST00000340703 885 ntBASIC22.68■■□□□ 1.22
HFM1A2PYH4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 REXO1L6P-201ENST00000603433 1515 ntBASIC22.68■■□□□ 1.22
HFM1A2PYH4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 TUBB1P2-201ENST00000422712 1306 ntBASIC22.68■■□□□ 1.22
HFM1A2PYH4 TUBB1P1-201ENST00000503144 1300 ntBASIC22.68■■□□□ 1.22
HFM1A2PYH4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 AL137783.1-201ENST00000623494 1896 ntBASIC22.68■■□□□ 1.22
HFM1A2PYH4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC22.68■■□□□ 1.22
HFM1A2PYH4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HFM1A2PYH4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 CNN2P10-201ENST00000443067 918 ntBASIC22.67■■□□□ 1.22
HFM1A2PYH4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC22.67■■□□□ 1.22
HFM1A2PYH4 AC009542.2-202ENST00000619004 1067 ntBASIC22.67■■□□□ 1.22
HFM1A2PYH4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 AC138035.3-201ENST00000622706 2791 ntBASIC22.67■■□□□ 1.22
HFM1A2PYH4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 CLUHP2-201ENST00000426660 1303 ntBASIC22.67■■□□□ 1.22
HFM1A2PYH4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC22.67■■□□□ 1.22
HFM1A2PYH4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HFM1A2PYH4 LILRP1-201ENST00000444199 1370 ntBASIC22.67■■□□□ 1.22
HFM1A2PYH4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HFM1A2PYH4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
HFM1A2PYH4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
HFM1A2PYH4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC22.66■■□□□ 1.22
HFM1A2PYH4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC22.66■■□□□ 1.22
HFM1A2PYH4 FAM86HP-204ENST00000513466 959 ntBASIC22.66■■□□□ 1.22
HFM1A2PYH4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC22.66■■□□□ 1.22
HFM1A2PYH4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
HFM1A2PYH4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC22.66■■□□□ 1.22
HFM1A2PYH4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC22.66■■□□□ 1.22
HFM1A2PYH4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC22.66■■□□□ 1.22
HFM1A2PYH4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HFM1A2PYH4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
HFM1A2PYH4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC22.66■■□□□ 1.22
HFM1A2PYH4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HFM1A2PYH4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HFM1A2PYH4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms