Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 MIR4525-201ENST00000580000 75 ntBASIC16.17■□□□□ 0.18
HPS4Q9NQG7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 AC005252.2-201ENST00000624630 1141 ntBASIC16.17■□□□□ 0.18
HPS4Q9NQG7 AL121723.1-201ENST00000445194 1519 ntBASIC16.17■□□□□ 0.18
HPS4Q9NQG7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HPS4Q9NQG7 AC018892.3-201ENST00000623986 2499 ntBASIC16.17■□□□□ 0.18
HPS4Q9NQG7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 MIR1908-201ENST00000410394 80 ntBASIC16.16■□□□□ 0.18
HPS4Q9NQG7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 ACTBP11-201ENST00000436287 1126 ntBASIC16.16■□□□□ 0.18
HPS4Q9NQG7 RPL7P3-201ENST00000441388 714 ntBASIC16.16■□□□□ 0.18
HPS4Q9NQG7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 CSF2RBP1-201ENST00000447905 391 ntBASIC16.16■□□□□ 0.18
HPS4Q9NQG7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 LINC00554-201ENST00000564841 3011 ntBASIC16.16■□□□□ 0.18
HPS4Q9NQG7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HPS4Q9NQG7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 AC006449.6-201ENST00000612330 2296 ntBASIC16.15■□□□□ 0.18
HPS4Q9NQG7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HPS4Q9NQG7 BAATP1-201ENST00000412284 1225 ntBASIC16.15■□□□□ 0.18
HPS4Q9NQG7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms