Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.15□□□□□ -0.14
CHD8Q9HCK8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 AC092299.1-201ENST00000632679 757 ntBASIC14.15□□□□□ -0.14
CHD8Q9HCK8 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.15□□□□□ -0.14
CHD8Q9HCK8 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CHD8Q9HCK8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.15□□□□□ -0.15
CHD8Q9HCK8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 DPY19L2P5-201ENST00000456300 331 ntBASIC14.14□□□□□ -0.15
CHD8Q9HCK8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 HLA-DMA-203ENST00000395305 777 ntBASIC14.14□□□□□ -0.15
CHD8Q9HCK8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 AC087392.5-201ENST00000612517 489 ntBASIC14.14□□□□□ -0.15
CHD8Q9HCK8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CHD8Q9HCK8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 EIF3FP3-201ENST00000434851 1086 ntBASIC14.13□□□□□ -0.15
CHD8Q9HCK8 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 CAP2-207ENST00000493172 861 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 FAM86B3P-203ENST00000523992 854 ntBASIC14.13□□□□□ -0.15
CHD8Q9HCK8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 AL008718.2-201ENST00000609206 1313 ntBASIC14.13□□□□□ -0.15
CHD8Q9HCK8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CHD8Q9HCK8 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms