Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 AP001282.1-201ENST00000531301 1499 ntBASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 AC015656.1-201ENST00000624209 3578 ntBASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
SND1-IT1Q9HBX3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 HMGA1P7-201ENST00000406908 502 ntBASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 OR7E14P-202ENST00000530490 1290 ntBASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 MIR3652-201ENST00000579335 131 ntBASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ACTL9-202ENST00000612068 1252 ntBASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SND1-IT1Q9HBX3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms