Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 AL138799.1-201ENST00000448213 1675 ntBASIC18.14■□□□□ 0.49
SH2D4AQ9H788 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 AC093525.8-201ENST00000624099 1342 ntBASIC18.14■□□□□ 0.49
SH2D4AQ9H788 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 MSTO2P-201ENST00000314835 1709 ntBASIC18.14■□□□□ 0.49
SH2D4AQ9H788 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SH2D4AQ9H788 AC132872.4-202ENST00000622924 2756 ntBASIC18.13■□□□□ 0.49
SH2D4AQ9H788 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 FAM21FP-201ENST00000426241 1131 ntBASIC18.13■□□□□ 0.49
SH2D4AQ9H788 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 AC092658.1-201ENST00000505836 891 ntBASIC18.13■□□□□ 0.49
SH2D4AQ9H788 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 RNA5SP412-201ENST00000516234 123 ntBASIC18.13■□□□□ 0.49
SH2D4AQ9H788 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 BX539320.1-201ENST00000623759 877 ntBASIC18.13■□□□□ 0.49
SH2D4AQ9H788 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SH2D4AQ9H788 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 CSF2RBP1-201ENST00000447905 391 ntBASIC18.12■□□□□ 0.49
SH2D4AQ9H788 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 KRT90P-201ENST00000549264 1064 ntBASIC18.12■□□□□ 0.49
SH2D4AQ9H788 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 RHOXF1P1-202ENST00000635473 501 ntBASIC18.12■□□□□ 0.49
SH2D4AQ9H788 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
SH2D4AQ9H788 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 AC099336.1-201ENST00000417053 1171 ntBASIC18.11■□□□□ 0.49
SH2D4AQ9H788 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SH2D4AQ9H788 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms