Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 AL353705.2-201ENST00000428243 662 ntBASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 AL592309.1-201ENST00000443127 649 ntBASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 TIMM8BP1-201ENST00000452384 211 ntBASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 UXT-AS1-201ENST00000590504 1525 ntBASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 SNX18-202ENST00000343017 3140 ntBASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 FO393414.2-201ENST00000405153 598 ntBASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 KRT18P58-201ENST00000527480 1120 ntBASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 SLC25A39P2-201ENST00000537614 270 ntBASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
POLR2J3Q9H1A7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
POLR2J3Q9H1A7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms