Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 AL139010.1-201ENST00000454878 894 ntBASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 PHKG1P2-201ENST00000457537 863 ntBASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COMMD4Q9H0A8 AC007686.3-201ENST00000619017 3487 ntBASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 AL138918.1-201ENST00000568306 659 ntBASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 AC026979.3-201ENST00000607315 403 ntBASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 AKAP8P1-201ENST00000434743 1349 ntBASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COMMD4Q9H0A8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.84□□□□□ -0.19
COMMD4Q9H0A8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COMMD4Q9H0A8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COMMD4Q9H0A8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COMMD4Q9H0A8 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COMMD4Q9H0A8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms