Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 CLUHP6-201ENST00000580789 941 ntBASIC18.14■□□□□ 0.49
SLF1Q9BQI6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF1Q9BQI6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 AC010491.1-201ENST00000563101 2797 ntBASIC18.13■□□□□ 0.49
SLF1Q9BQI6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 AL133267.1-201ENST00000398220 340 ntBASIC18.13■□□□□ 0.49
SLF1Q9BQI6 BCRP2-202ENST00000447763 634 ntBASIC18.13■□□□□ 0.49
SLF1Q9BQI6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 BCRP6-201ENST00000510112 632 ntBASIC18.13■□□□□ 0.49
SLF1Q9BQI6 BCRP7-201ENST00000511549 544 ntBASIC18.13■□□□□ 0.49
SLF1Q9BQI6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 MIR4313-201ENST00000580760 101 ntBASIC18.13■□□□□ 0.49
SLF1Q9BQI6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 PDIA3P1-201ENST00000471856 1510 ntBASIC18.13■□□□□ 0.49
SLF1Q9BQI6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SLF1Q9BQI6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 AC005229.1-201ENST00000392885 409 ntBASIC18.12■□□□□ 0.49
SLF1Q9BQI6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 AC026410.3-201ENST00000514280 936 ntBASIC18.12■□□□□ 0.49
SLF1Q9BQI6 AP001889.1-201ENST00000525414 633 ntBASIC18.12■□□□□ 0.49
SLF1Q9BQI6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 AC009486.1-201ENST00000569860 813 ntBASIC18.12■□□□□ 0.49
SLF1Q9BQI6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 AC005252.2-201ENST00000624630 1141 ntBASIC18.12■□□□□ 0.49
SLF1Q9BQI6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLF1Q9BQI6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 AP001063.1-201ENST00000568332 529 ntBASIC18.11■□□□□ 0.49
SLF1Q9BQI6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 AC069224.1-201ENST00000566372 1715 ntBASIC18.11■□□□□ 0.49
SLF1Q9BQI6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.11■□□□□ 0.49
SLF1Q9BQI6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms