Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 FTH1P22-201ENST00000456305 520 ntBASIC20.12■□□□□ 0.81
ABCA3Q99758 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC20.12■□□□□ 0.81
ABCA3Q99758 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC20.12■□□□□ 0.81
ABCA3Q99758 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.12■□□□□ 0.81
ABCA3Q99758 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ABCA3Q99758 AL161773.1-201ENST00000624845 863 ntBASIC20.12■□□□□ 0.81
ABCA3Q99758 SLC9A7P1-202ENST00000556476 2239 ntBASIC20.12■□□□□ 0.81
ABCA3Q99758 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ABCA3Q99758 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ABCA3Q99758 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ABCA3Q99758 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 AC136759.1-202ENST00000530858 2194 ntBASIC20.11■□□□□ 0.81
ABCA3Q99758 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 AC012441.2-201ENST00000444843 739 ntBASIC20.11■□□□□ 0.81
ABCA3Q99758 CHCHD2P9-201ENST00000461726 456 ntBASIC20.11■□□□□ 0.81
ABCA3Q99758 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC20.11■□□□□ 0.81
ABCA3Q99758 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ABCA3Q99758 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
ABCA3Q99758 AC107464.3-201ENST00000609172 737 ntBASIC20.11■□□□□ 0.81
ABCA3Q99758 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.11■□□□□ 0.81
ABCA3Q99758 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC20.11■□□□□ 0.81
ABCA3Q99758 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.11■□□□□ 0.81
ABCA3Q99758 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ABCA3Q99758 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.1■□□□□ 0.81
ABCA3Q99758 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ABCA3Q99758 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 AL132780.4-201ENST00000624870 1135 ntBASIC20.1■□□□□ 0.81
ABCA3Q99758 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ABCA3Q99758 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ABCA3Q99758 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC20.1■□□□□ 0.81
ABCA3Q99758 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.1■□□□□ 0.81
ABCA3Q99758 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.1■□□□□ 0.81
ABCA3Q99758 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.1■□□□□ 0.81
ABCA3Q99758 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ABCA3Q99758 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.1■□□□□ 0.81
ABCA3Q99758 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.1■□□□□ 0.81
ABCA3Q99758 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC20.1■□□□□ 0.81
ABCA3Q99758 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 OR2R1P-201ENST00000441404 914 ntBASIC20.1■□□□□ 0.81
ABCA3Q99758 AC009145.4-201ENST00000625119 1294 ntBASIC20.1■□□□□ 0.81
ABCA3Q99758 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ABCA3Q99758 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.1■□□□□ 0.81
ABCA3Q99758 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC20.1■□□□□ 0.81
ABCA3Q99758 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ABCA3Q99758 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ABCA3Q99758 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 TNRC18P3-201ENST00000441896 2691 ntBASIC20.09■□□□□ 0.81
ABCA3Q99758 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.09■□□□□ 0.81
ABCA3Q99758 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ABCA3Q99758 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.09■□□□□ 0.81
ABCA3Q99758 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 AL627422.1-201ENST00000434104 580 ntBASIC20.09■□□□□ 0.81
ABCA3Q99758 DUTP3-201ENST00000450025 415 ntBASIC20.09■□□□□ 0.81
ABCA3Q99758 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ABCA3Q99758 AC130709.1-201ENST00000484779 1212 ntBASIC20.09■□□□□ 0.81
ABCA3Q99758 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.09■□□□□ 0.81
ABCA3Q99758 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ABCA3Q99758 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.09■□□□□ 0.81
ABCA3Q99758 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.09■□□□□ 0.81
ABCA3Q99758 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC20.09■□□□□ 0.81
ABCA3Q99758 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ABCA3Q99758 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
ABCA3Q99758 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ABCA3Q99758 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC20.09■□□□□ 0.81
ABCA3Q99758 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ABCA3Q99758 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
ABCA3Q99758 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
ABCA3Q99758 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ABCA3Q99758 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms