Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
BBS4Q96RK4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BBS4Q96RK4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 FO538757.1-201ENST00000623083 1397 ntBASIC14.85□□□□□ -0.03
BBS4Q96RK4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 RPL37AP1-201ENST00000412502 279 ntBASIC14.85□□□□□ -0.03
BBS4Q96RK4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 TARDBPP1-201ENST00000442013 1203 ntBASIC14.85□□□□□ -0.03
BBS4Q96RK4 KLF2P3-201ENST00000451977 1087 ntBASIC14.85□□□□□ -0.03
BBS4Q96RK4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 AL033527.5-202ENST00000641632 1098 ntBASIC14.85□□□□□ -0.03
BBS4Q96RK4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
BBS4Q96RK4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 HLA-V-204ENST00000476601 1289 ntBASIC14.84□□□□□ -0.03
BBS4Q96RK4 AC067863.1-201ENST00000494933 530 ntBASIC14.84□□□□□ -0.03
BBS4Q96RK4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BBS4Q96RK4 AC069120.2-201ENST00000524091 540 ntBASIC14.84□□□□□ -0.03
BBS4Q96RK4 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.84□□□□□ -0.03
BBS4Q96RK4 SPDYE12P-201ENST00000618416 771 ntBASIC14.84□□□□□ -0.03
BBS4Q96RK4 AC073592.8-201ENST00000624126 511 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms