Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC023310.1-201ENST00000554836 735 ntBASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 MIR6727-201ENST00000620702 65 ntBASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYNGAP1Q96PV0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 AC006001.1-201ENST00000325130 474 ntBASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 KRT18P25-201ENST00000508931 1278 ntBASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 MIR4313-201ENST00000580760 101 ntBASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYNGAP1Q96PV0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 MIR1247-201ENST00000408206 136 ntBASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.65■□□□□ 0.42
SYNGAP1Q96PV0 FAM86HP-204ENST00000513466 959 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms