Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 AC067750.1-201ENST00000608826 6545 ntBASIC15.07■□□□□ 0
VPS33AQ96AX1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 AC232323.1-201ENST00000540724 2099 ntBASIC15.07■□□□□ 0
VPS33AQ96AX1 REXO1L5P-201ENST00000622260 2098 ntBASIC15.07■□□□□ 0
VPS33AQ96AX1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.07■□□□□ 0
VPS33AQ96AX1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.07■□□□□ 0
VPS33AQ96AX1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.07■□□□□ 0
VPS33AQ96AX1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 PHKG1P2-201ENST00000457537 863 ntBASIC15.07■□□□□ 0
VPS33AQ96AX1 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.07■□□□□ 0
VPS33AQ96AX1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.07■□□□□ 0
VPS33AQ96AX1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.07■□□□□ 0
VPS33AQ96AX1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.07■□□□□ 0
VPS33AQ96AX1 AC008267.7-201ENST00000624570 1194 ntBASIC15.07■□□□□ 0
VPS33AQ96AX1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
VPS33AQ96AX1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 AC139749.1-202ENST00000617529 3139 ntBASIC15.07■□□□□ 0
VPS33AQ96AX1 AL390755.1-201ENST00000623716 2027 ntBASIC15.07■□□□□ 0
VPS33AQ96AX1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
VPS33AQ96AX1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VPS33AQ96AX1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 AC007191.1-201ENST00000623179 2995 ntBASIC15.06■□□□□ 0
VPS33AQ96AX1 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.06■□□□□ 0
VPS33AQ96AX1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VPS33AQ96AX1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.06■□□□□ 0
VPS33AQ96AX1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VPS33AQ96AX1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.06■□□□□ 0
VPS33AQ96AX1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VPS33AQ96AX1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.06■□□□□ 0
VPS33AQ96AX1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.06■□□□□ 0
VPS33AQ96AX1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.06■□□□□ 0
VPS33AQ96AX1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.06■□□□□ 0
VPS33AQ96AX1 RPL13AP23-201ENST00000480739 586 ntBASIC15.06■□□□□ 0
VPS33AQ96AX1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.06■□□□□ 0
VPS33AQ96AX1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.06■□□□□ 0
VPS33AQ96AX1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.06■□□□□ 0
VPS33AQ96AX1 AKAP8P1-201ENST00000434743 1349 ntBASIC15.06■□□□□ 0
VPS33AQ96AX1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.06■□□□□ 0
VPS33AQ96AX1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
VPS33AQ96AX1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.06■□□□□ 0
VPS33AQ96AX1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.06■□□□□ 0
VPS33AQ96AX1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.06■□□□□ 0
VPS33AQ96AX1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VPS33AQ96AX1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.06■□□□□ 0
VPS33AQ96AX1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS33AQ96AX1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.06■□□□□ 0
VPS33AQ96AX1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VPS33AQ96AX1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.05■□□□□ 0
VPS33AQ96AX1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
VPS33AQ96AX1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VPS33AQ96AX1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
VPS33AQ96AX1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
VPS33AQ96AX1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.05■□□□□ -0
VPS33AQ96AX1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS33AQ96AX1 TFAMP1-201ENST00000412727 736 ntBASIC15.05■□□□□ -0
VPS33AQ96AX1 AL355306.1-201ENST00000415580 579 ntBASIC15.05■□□□□ -0
VPS33AQ96AX1 AL671277.1-201ENST00000429656 993 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms