Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CKAP2Q8WWK9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 AL136982.4-201ENST00000437689 1740 ntBASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 AL359881.3-201ENST00000602640 1721 ntBASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 AP002414.3-201ENST00000589352 1468 ntBASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 AKR1C7P-201ENST00000305623 895 ntBASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 HNRNPUP1-201ENST00000554987 333 ntBASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 PRELID1P1-202ENST00000567272 903 ntBASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CKAP2Q8WWK9 AC084364.1-201ENST00000551967 1556 ntBASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 KRT8P37-201ENST00000451609 1420 ntBASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 AC015802.1-201ENST00000588104 1449 ntBASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 AC098859.1-201ENST00000502915 1238 ntBASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 AL121772.3-201ENST00000610840 674 ntBASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CKAP2Q8WWK9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms