Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 KY-205ENST00000508956 2422 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 PRKCQ-202ENST00000397176 3096 ntTSL 5 BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SVIPQ8NHG7 SFI1-204ENST00000400289 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 VWA5B1-202ENST00000375079 3859 ntAPPRIS P5 TSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 AC108215.1-201ENST00000624463 3226 ntBASIC9.49□□□□□ -0.89
SVIPQ8NHG7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 FYN-229ENST00000538466 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 GIMAP6-203ENST00000618759 3910 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 RPSAP41-201ENST00000439695 860 ntBASIC9.49□□□□□ -0.89
SVIPQ8NHG7 ANKRD20A11P-205ENST00000442192 920 ntTSL 3 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 AP000322.1-201ENST00000450895 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 CU633980.2-201ENST00000624951 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 AL512506.3-201ENST00000627615 1792 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 CLDN4-203ENST00000435050 4163 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 MTHFR-217ENST00000641820 1569 ntBASIC9.49□□□□□ -0.89
SVIPQ8NHG7 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 AC122129.1-201ENST00000354746 1815 ntBASIC9.49□□□□□ -0.89
SVIPQ8NHG7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 AC011447.6-201ENST00000623510 2598 ntBASIC9.49□□□□□ -0.89
SVIPQ8NHG7 LINC01163-202ENST00000630252 3086 ntTSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 ZC4H2-201ENST00000337990 2363 ntTSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 TLR9-201ENST00000360658 3870 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 AC009533.1-201ENST00000539757 3158 ntBASIC9.49□□□□□ -0.89
SVIPQ8NHG7 HNRNPR-203ENST00000374616 2691 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SVIPQ8NHG7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 SIM1-201ENST00000262901 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 AC093904.4-201ENST00000565044 3273 ntBASIC9.48□□□□□ -0.89
SVIPQ8NHG7 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 DBIL5P-203ENST00000536214 2677 ntBASIC9.48□□□□□ -0.89
SVIPQ8NHG7 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 AC109635.5-201ENST00000533593 962 ntBASIC9.48□□□□□ -0.89
SVIPQ8NHG7 ADAM3B-201ENST00000569937 840 ntBASIC9.48□□□□□ -0.89
SVIPQ8NHG7 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 VIT-205ENST00000404084 2438 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC9.48□□□□□ -0.89
SVIPQ8NHG7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms