Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 AC092658.1-201ENST00000505836 891 ntBASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC38A9Q8NBW4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
SLC38A9Q8NBW4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 DOC2GP-204ENST00000639052 2548 ntBASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 FO681548.1-201ENST00000455617 1132 ntBASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AP005019.2-201ENST00000615104 511 ntBASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC38A9Q8NBW4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC38A9Q8NBW4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC38A9Q8NBW4 CICP13-201ENST00000422015 2789 ntBASIC14.63□□□□□ -0.07
SLC38A9Q8NBW4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC38A9Q8NBW4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC38A9Q8NBW4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC38A9Q8NBW4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms