Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.25□□□□□ -0.45
C3orf56Q8N813 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 Z97180.1-201ENST00000445173 988 ntBASIC12.25□□□□□ -0.45
C3orf56Q8N813 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 AC132938.4-201ENST00000623835 848 ntBASIC12.25□□□□□ -0.45
C3orf56Q8N813 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 LINC01144-201ENST00000626198 1710 ntBASIC12.25□□□□□ -0.45
C3orf56Q8N813 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
C3orf56Q8N813 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
C3orf56Q8N813 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.24□□□□□ -0.45
C3orf56Q8N813 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.24□□□□□ -0.45
C3orf56Q8N813 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
C3orf56Q8N813 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
C3orf56Q8N813 FTLP1-201ENST00000449155 526 ntBASIC12.24□□□□□ -0.45
C3orf56Q8N813 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms