Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD1Q8N668 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD1Q8N668 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
COMMD1Q8N668 SLC22A20-204ENST00000530038 1673 ntBASIC13.07□□□□□ -0.32
COMMD1Q8N668 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 AC008677.1-201ENST00000519230 1561 ntBASIC13.07□□□□□ -0.32
COMMD1Q8N668 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
COMMD1Q8N668 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD1Q8N668 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD1Q8N668 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD1Q8N668 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.06□□□□□ -0.32
COMMD1Q8N668 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 TFAMP1-201ENST00000412727 736 ntBASIC13.06□□□□□ -0.32
COMMD1Q8N668 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 ADH5P3-201ENST00000433842 1137 ntBASIC13.06□□□□□ -0.32
COMMD1Q8N668 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 AC099522.2-201ENST00000607001 744 ntBASIC13.06□□□□□ -0.32
COMMD1Q8N668 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 AC005840.4-201ENST00000541242 2494 ntBASIC13.06□□□□□ -0.32
COMMD1Q8N668 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.06□□□□□ -0.32
COMMD1Q8N668 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD1Q8N668 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.06□□□□□ -0.32
COMMD1Q8N668 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.05□□□□□ -0.32
COMMD1Q8N668 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
COMMD1Q8N668 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms