Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 AC026979.3-201ENST00000607315 403 ntBASIC15.78■□□□□ 0.12
RAPH1Q70E73 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.78■□□□□ 0.12
RAPH1Q70E73 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAPH1Q70E73 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 AC079140.1-201ENST00000508039 487 ntBASIC15.77■□□□□ 0.12
RAPH1Q70E73 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 KRT8P48-201ENST00000515599 1220 ntBASIC15.77■□□□□ 0.12
RAPH1Q70E73 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAPH1Q70E73 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.77■□□□□ 0.12
RAPH1Q70E73 AC005089.1-201ENST00000619486 2241 ntBASIC15.77■□□□□ 0.12
RAPH1Q70E73 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAPH1Q70E73 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
RAPH1Q70E73 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAPH1Q70E73 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RAPH1Q70E73 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.77■□□□□ 0.11
RAPH1Q70E73 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAPH1Q70E73 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAPH1Q70E73 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.77■□□□□ 0.11
RAPH1Q70E73 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAPH1Q70E73 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.77■□□□□ 0.11
RAPH1Q70E73 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.77■□□□□ 0.11
RAPH1Q70E73 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAPH1Q70E73 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.77■□□□□ 0.11
RAPH1Q70E73 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.77■□□□□ 0.11
RAPH1Q70E73 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 AC067750.1-201ENST00000608826 6545 ntBASIC15.76■□□□□ 0.11
RAPH1Q70E73 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 MIR346-201ENST00000362234 95 ntBASIC15.76■□□□□ 0.11
RAPH1Q70E73 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 PHKG1P2-201ENST00000457537 863 ntBASIC15.76■□□□□ 0.11
RAPH1Q70E73 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 AC040169.1-201ENST00000565382 521 ntBASIC15.76■□□□□ 0.11
RAPH1Q70E73 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.76■□□□□ 0.11
RAPH1Q70E73 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAPH1Q70E73 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms