Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 FDX1P1-201ENST00000449115 551 ntBASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AC023908.3-201ENST00000564211 3047 ntBASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMARCD3Q6STE5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 AC023274.1-201ENST00000418278 595 ntBASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 AC079140.1-201ENST00000508039 487 ntBASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 KRT8P48-201ENST00000515599 1220 ntBASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 LINC01225-203ENST00000563550 1244 ntBASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMARCD3Q6STE5 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMARCD3Q6STE5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms