Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AC112693.3-201ENST00000624819 1983 ntBASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AC024267.1-201ENST00000582320 895 ntBASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AC139530.3-201ENST00000620344 690 ntBASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 UXT-AS1-201ENST00000590504 1525 ntBASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 AC232323.1-201ENST00000540724 2099 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 REXO1L5P-201ENST00000622260 2098 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 AL390755.1-201ENST00000623716 2027 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 DNAJB3-202ENST00000449667 1266 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 AC093520.2-201ENST00000561830 333 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 SNHG9-202ENST00000564014 471 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 AL691403.2-201ENST00000618460 490 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 AC013726.1-201ENST00000563747 2285 ntBASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATPAF1Q5TC12 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ATPAF1Q5TC12 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ATPAF1Q5TC12 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms