Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 AC105233.2-201ENST00000523697 349 ntBASIC17.23■□□□□ 0.35
TSR1Q2NL82 KRT18P58-201ENST00000527480 1120 ntBASIC17.23■□□□□ 0.35
TSR1Q2NL82 AF228730.5-201ENST00000530288 346 ntBASIC17.23■□□□□ 0.35
TSR1Q2NL82 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 KRT19P2-202ENST00000557173 1012 ntBASIC17.23■□□□□ 0.35
TSR1Q2NL82 AC061975.2-201ENST00000581722 295 ntBASIC17.23■□□□□ 0.35
TSR1Q2NL82 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 AC007292.2-201ENST00000593524 1812 ntBASIC17.23■□□□□ 0.35
TSR1Q2NL82 AC009090.5-201ENST00000624886 2285 ntBASIC17.23■□□□□ 0.35
TSR1Q2NL82 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TSR1Q2NL82 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TSR1Q2NL82 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 IGHV3-22-201ENST00000520721 359 ntBASIC17.22■□□□□ 0.35
TSR1Q2NL82 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 AC145285.3-201ENST00000564603 959 ntBASIC17.22■□□□□ 0.35
TSR1Q2NL82 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 AC073389.1-201ENST00000595595 795 ntBASIC17.22■□□□□ 0.35
TSR1Q2NL82 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 AC068137.2-201ENST00000605408 478 ntBASIC17.22■□□□□ 0.35
TSR1Q2NL82 Z83851.2-201ENST00000609564 659 ntBASIC17.22■□□□□ 0.35
TSR1Q2NL82 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.22■□□□□ 0.35
TSR1Q2NL82 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TSR1Q2NL82 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.21■□□□□ 0.35
TSR1Q2NL82 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.21■□□□□ 0.35
TSR1Q2NL82 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TSR1Q2NL82 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TSR1Q2NL82 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms