Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEP78395 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEP78395 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEP78395 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEP78395 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEP78395 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEP78395 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEP78395 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 AL139400.1-201ENST00000366220 510 ntBASIC15.81■□□□□ 0.12
PRAMEP78395 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEP78395 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEP78395 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEP78395 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEP78395 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEP78395 HIST3H2BA-201ENST00000436555 524 ntBASIC15.81■□□□□ 0.12
PRAMEP78395 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEP78395 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.81■□□□□ 0.12
PRAMEP78395 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEP78395 AC125807.1-201ENST00000483097 614 ntBASIC15.81■□□□□ 0.12
PRAMEP78395 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEP78395 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEP78395 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEP78395 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEP78395 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PRAMEP78395 TNRC18P2-201ENST00000417666 2714 ntBASIC15.81■□□□□ 0.12
PRAMEP78395 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEP78395 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEP78395 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEP78395 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEP78395 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEP78395 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 TUBB3P1-201ENST00000405796 1332 ntBASIC15.8■□□□□ 0.12
PRAMEP78395 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.8■□□□□ 0.12
PRAMEP78395 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.8■□□□□ 0.12
PRAMEP78395 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEP78395 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.8■□□□□ 0.12
PRAMEP78395 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.8■□□□□ 0.12
PRAMEP78395 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PRAMEP78395 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
PRAMEP78395 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
PRAMEP78395 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEP78395 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEP78395 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEP78395 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
PRAMEP78395 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEP78395 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PRAMEP78395 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PRAMEP78395 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PRAMEP78395 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms