Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.07□□□□□ -0.16
VBP1P61758 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 WASH3P-207ENST00000560956 1394 ntBASIC14.07□□□□□ -0.16
VBP1P61758 FO538757.1-201ENST00000623083 1397 ntBASIC14.07□□□□□ -0.16
VBP1P61758 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.06□□□□□ -0.16
VBP1P61758 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 NSUN5P1-202ENST00000421140 1535 ntBASIC14.06□□□□□ -0.16
VBP1P61758 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.06□□□□□ -0.16
VBP1P61758 NSUN5P2-203ENST00000457352 1529 ntBASIC14.06□□□□□ -0.16
VBP1P61758 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.06□□□□□ -0.16
VBP1P61758 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VBP1P61758 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VBP1P61758 MST1P2-201ENST00000457982 2291 ntBASIC14.06□□□□□ -0.16
VBP1P61758 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 AC018529.2-202ENST00000611482 3087 ntBASIC14.06□□□□□ -0.16
VBP1P61758 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VBP1P61758 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VBP1P61758 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.06□□□□□ -0.16
VBP1P61758 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.06□□□□□ -0.16
VBP1P61758 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VBP1P61758 MIR4497-201ENST00000583208 89 ntBASIC14.06□□□□□ -0.16
VBP1P61758 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VBP1P61758 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.06□□□□□ -0.16
VBP1P61758 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 AL022326.1-202ENST00000641533 845 ntBASIC14.06□□□□□ -0.16
VBP1P61758 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.06□□□□□ -0.16
VBP1P61758 PPT1-213ENST00000641319 2388 ntBASIC14.06□□□□□ -0.16
VBP1P61758 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.06□□□□□ -0.16
VBP1P61758 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.06□□□□□ -0.16
VBP1P61758 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.06□□□□□ -0.16
VBP1P61758 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VBP1P61758 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VBP1P61758 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.05□□□□□ -0.16
VBP1P61758 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
VBP1P61758 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VBP1P61758 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.05□□□□□ -0.16
VBP1P61758 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.05□□□□□ -0.16
VBP1P61758 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 AC092647.4-201ENST00000457211 535 ntBASIC14.05□□□□□ -0.16
VBP1P61758 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 Z69720.1-201ENST00000601483 472 ntBASIC14.05□□□□□ -0.16
VBP1P61758 AL589182.2-201ENST00000619332 1049 ntBASIC14.05□□□□□ -0.16
VBP1P61758 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.05□□□□□ -0.16
VBP1P61758 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VBP1P61758 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
VBP1P61758 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VBP1P61758 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VBP1P61758 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms