Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.62■□□□□ 0.25
CDH8P55286 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 BRI3BPP1-201ENST00000594224 787 ntBASIC16.62■□□□□ 0.25
CDH8P55286 TMEM261P1-201ENST00000604899 340 ntBASIC16.62■□□□□ 0.25
CDH8P55286 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH8P55286 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH8P55286 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CDH8P55286 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDH8P55286 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.62■□□□□ 0.25
CDH8P55286 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDH8P55286 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 AC013268.4-201ENST00000637413 2228 ntBASIC16.61■□□□□ 0.25
CDH8P55286 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH8P55286 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CDH8P55286 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH8P55286 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH8P55286 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH8P55286 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH8P55286 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH8P55286 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH8P55286 AL359711.2-201ENST00000563105 872 ntBASIC16.61■□□□□ 0.25
CDH8P55286 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
CDH8P55286 AC239800.4-201ENST00000603712 296 ntBASIC16.61■□□□□ 0.25
CDH8P55286 WFDC1-204ENST00000613603 549 ntBASIC16.61■□□□□ 0.25
CDH8P55286 AC105233.6-201ENST00000642093 218 ntBASIC16.61■□□□□ 0.25
CDH8P55286 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDH8P55286 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH8P55286 CICP11-201ENST00000434745 2827 ntBASIC16.61■□□□□ 0.25
CDH8P55286 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH8P55286 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CDH8P55286 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 C18orf15-201ENST00000623680 2534 ntBASIC16.61■□□□□ 0.25
CDH8P55286 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDH8P55286 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH8P55286 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH8P55286 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDH8P55286 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 LINC00554-201ENST00000564841 3011 ntBASIC16.6■□□□□ 0.25
CDH8P55286 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH8P55286 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH8P55286 TMBIM7P-203ENST00000641617 1718 ntBASIC16.6■□□□□ 0.25
CDH8P55286 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CDH8P55286 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDH8P55286 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH8P55286 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH8P55286 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH8P55286 RN7SL692P-201ENST00000464677 288 ntBASIC16.6■□□□□ 0.25
CDH8P55286 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH8P55286 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH8P55286 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CDH8P55286 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH8P55286 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH8P55286 AL596325.1-201ENST00000563991 1082 ntBASIC16.6■□□□□ 0.25
CDH8P55286 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDH8P55286 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms