Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.29■□□□□ 0.2
HADHBP55084 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HADHBP55084 AC010327.4-202ENST00000591484 748 ntBASIC16.29■□□□□ 0.2
HADHBP55084 AC000095.1-201ENST00000603208 874 ntBASIC16.29■□□□□ 0.2
HADHBP55084 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.29■□□□□ 0.2
HADHBP55084 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HADHBP55084 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HADHBP55084 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HADHBP55084 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HADHBP55084 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.29■□□□□ 0.2
HADHBP55084 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
HADHBP55084 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.29■□□□□ 0.2
HADHBP55084 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
HADHBP55084 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
HADHBP55084 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.28■□□□□ 0.2
HADHBP55084 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HADHBP55084 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHBP55084 AP000347.1-202ENST00000435868 847 ntBASIC16.28■□□□□ 0.2
HADHBP55084 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 AP006288.1-201ENST00000446065 395 ntBASIC16.28■□□□□ 0.2
HADHBP55084 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 AC010336.2-201ENST00000564226 506 ntBASIC16.28■□□□□ 0.2
HADHBP55084 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHBP55084 TEX28P1-201ENST00000613479 1221 ntBASIC16.28■□□□□ 0.2
HADHBP55084 TEX28P2-201ENST00000617764 1221 ntBASIC16.28■□□□□ 0.2
HADHBP55084 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHBP55084 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHBP55084 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHBP55084 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.28■□□□□ 0.2
HADHBP55084 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HADHBP55084 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HADHBP55084 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
HADHBP55084 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HADHBP55084 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.27■□□□□ 0.2
HADHBP55084 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HADHBP55084 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HADHBP55084 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 AC211486.1-202ENST00000416371 468 ntBASIC16.27■□□□□ 0.2
HADHBP55084 BX842568.4-201ENST00000421222 227 ntBASIC16.27■□□□□ 0.2
HADHBP55084 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.27■□□□□ 0.2
HADHBP55084 HLA-J-203ENST00000494367 1087 ntBASIC16.27■□□□□ 0.2
HADHBP55084 AC211476.1-201ENST00000503899 468 ntBASIC16.27■□□□□ 0.2
HADHBP55084 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HADHBP55084 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HADHBP55084 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
HADHBP55084 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.27■□□□□ 0.2
HADHBP55084 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.27■□□□□ 0.2
HADHBP55084 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.27■□□□□ 0.2
HADHBP55084 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HADHBP55084 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.27■□□□□ 0.2
HADHBP55084 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms