Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.17■□□□□ 0.34
PMS1P54277 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.17■□□□□ 0.34
PMS1P54277 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.17■□□□□ 0.34
PMS1P54277 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.17■□□□□ 0.34
PMS1P54277 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PMS1P54277 AC023511.2-201ENST00000618803 211 ntBASIC17.17■□□□□ 0.34
PMS1P54277 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 AC093028.1-201ENST00000622998 982 ntBASIC17.17■□□□□ 0.34
PMS1P54277 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
PMS1P54277 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.17■□□□□ 0.34
PMS1P54277 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.17■□□□□ 0.34
PMS1P54277 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PMS1P54277 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PMS1P54277 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 AC013726.1-201ENST00000563747 2285 ntBASIC17.17■□□□□ 0.34
PMS1P54277 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 AP000845.1-201ENST00000581677 2131 ntBASIC17.17■□□□□ 0.34
PMS1P54277 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.16■□□□□ 0.34
PMS1P54277 AL359258.3-201ENST00000622910 2331 ntBASIC17.16■□□□□ 0.34
PMS1P54277 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.16■□□□□ 0.34
PMS1P54277 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PMS1P54277 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PMS1P54277 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.16■□□□□ 0.34
PMS1P54277 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.16■□□□□ 0.34
PMS1P54277 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.16■□□□□ 0.34
PMS1P54277 RPL5P21-201ENST00000404620 815 ntBASIC17.16■□□□□ 0.34
PMS1P54277 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.16■□□□□ 0.34
PMS1P54277 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.16■□□□□ 0.34
PMS1P54277 SERBP1P3-201ENST00000459980 809 ntBASIC17.16■□□□□ 0.34
PMS1P54277 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 AC125807.1-201ENST00000483097 614 ntBASIC17.16■□□□□ 0.34
PMS1P54277 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.16■□□□□ 0.34
PMS1P54277 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.16■□□□□ 0.34
PMS1P54277 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.16■□□□□ 0.34
PMS1P54277 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PMS1P54277 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.16■□□□□ 0.34
PMS1P54277 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.16■□□□□ 0.34
PMS1P54277 AL844908.2-201ENST00000609461 460 ntBASIC17.16■□□□□ 0.34
PMS1P54277 AC073592.8-201ENST00000624126 511 ntBASIC17.16■□□□□ 0.34
PMS1P54277 AL109936.8-201ENST00000641772 604 ntBASIC17.16■□□□□ 0.34
PMS1P54277 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.16■□□□□ 0.34
PMS1P54277 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.16■□□□□ 0.34
PMS1P54277 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.16■□□□□ 0.34
PMS1P54277 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PMS1P54277 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PMS1P54277 AL136379.1-201ENST00000623471 2642 ntBASIC17.16■□□□□ 0.34
PMS1P54277 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.15■□□□□ 0.34
PMS1P54277 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.15■□□□□ 0.34
PMS1P54277 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.15■□□□□ 0.34
PMS1P54277 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PMS1P54277 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PMS1P54277 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 AC099063.4-201ENST00000641099 1602 ntBASIC17.15■□□□□ 0.34
PMS1P54277 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms