Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AC138649.4-201ENST00000612222 287 ntBASIC13.94□□□□□ -0.18
CSNK1A1P48729 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CSNK1A1P48729 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.94□□□□□ -0.18
CSNK1A1P48729 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AC092384.3-202ENST00000564646 2873 ntBASIC13.93□□□□□ -0.18
CSNK1A1P48729 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AC009090.5-201ENST00000624886 2285 ntBASIC13.93□□□□□ -0.18
CSNK1A1P48729 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AC044860.1-202ENST00000559481 777 ntBASIC13.93□□□□□ -0.18
CSNK1A1P48729 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AL844908.2-201ENST00000609461 460 ntBASIC13.93□□□□□ -0.18
CSNK1A1P48729 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 PPT1-215ENST00000641471 2368 ntBASIC13.93□□□□□ -0.18
CSNK1A1P48729 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.93□□□□□ -0.18
CSNK1A1P48729 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CSNK1A1P48729 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.92□□□□□ -0.18
CSNK1A1P48729 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CSNK1A1P48729 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms