Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RFC5P40937 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.19■□□□□ 0.34
RFC5P40937 AP001063.1-201ENST00000568332 529 ntBASIC17.19■□□□□ 0.34
RFC5P40937 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFC5P40937 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.19■□□□□ 0.34
RFC5P40937 AC008735.3-201ENST00000596646 500 ntBASIC17.19■□□□□ 0.34
RFC5P40937 AC005252.2-201ENST00000624630 1141 ntBASIC17.19■□□□□ 0.34
RFC5P40937 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RFC5P40937 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RFC5P40937 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
RFC5P40937 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFC5P40937 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC5P40937 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RFC5P40937 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 HCG24-202ENST00000414398 717 ntTSL 3 BASIC17.18■□□□□ 0.34
RFC5P40937 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.18■□□□□ 0.34
RFC5P40937 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.18■□□□□ 0.34
RFC5P40937 TDH-203ENST00000531764 1110 ntBASIC17.18■□□□□ 0.34
RFC5P40937 CLUHP6-201ENST00000580789 941 ntBASIC17.18■□□□□ 0.34
RFC5P40937 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.18■□□□□ 0.34
RFC5P40937 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.18■□□□□ 0.34
RFC5P40937 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RFC5P40937 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
RFC5P40937 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFC5P40937 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFC5P40937 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
RFC5P40937 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
RFC5P40937 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 AL138799.1-201ENST00000448213 1675 ntBASIC17.17■□□□□ 0.34
RFC5P40937 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 GPR53P-205ENST00000457298 1084 ntBASIC17.17■□□□□ 0.34
RFC5P40937 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RFC5P40937 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.17■□□□□ 0.34
RFC5P40937 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.17■□□□□ 0.34
RFC5P40937 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.17■□□□□ 0.34
RFC5P40937 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.17■□□□□ 0.34
RFC5P40937 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.17■□□□□ 0.34
RFC5P40937 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.17■□□□□ 0.34
RFC5P40937 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.17■□□□□ 0.34
RFC5P40937 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 AL645728.2-202ENST00000641679 227 ntBASIC17.17■□□□□ 0.34
RFC5P40937 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.17■□□□□ 0.34
RFC5P40937 AC105250.1-201ENST00000509378 2057 ntBASIC17.17■□□□□ 0.34
RFC5P40937 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RFC5P40937 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFC5P40937 TSPY26P-202ENST00000565928 3884 ntBASIC17.17■□□□□ 0.34
RFC5P40937 PRAL-201ENST00000624952 3286 ntBASIC17.16■□□□□ 0.34
RFC5P40937 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RFC5P40937 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms