Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 AC023024.2-201ENST00000623561 1993 ntBASIC17.88■□□□□ 0.45
KRT2P35908 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
KRT2P35908 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KRT2P35908 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.88■□□□□ 0.45
KRT2P35908 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.88■□□□□ 0.45
KRT2P35908 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.88■□□□□ 0.45
KRT2P35908 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
KRT2P35908 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT2P35908 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.88■□□□□ 0.45
KRT2P35908 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT2P35908 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 NORAD-201ENST00000565493 5339 ntBASIC17.87■□□□□ 0.45
KRT2P35908 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
KRT2P35908 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
KRT2P35908 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT2P35908 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.87■□□□□ 0.45
KRT2P35908 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
KRT2P35908 UGT1A2P-201ENST00000454886 866 ntBASIC17.87■□□□□ 0.45
KRT2P35908 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
KRT2P35908 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
KRT2P35908 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.87■□□□□ 0.45
KRT2P35908 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT2P35908 AC000095.1-201ENST00000603208 874 ntBASIC17.87■□□□□ 0.45
KRT2P35908 AC025181.2-201ENST00000606994 802 ntBASIC17.87■□□□□ 0.45
KRT2P35908 AL391069.4-201ENST00000609583 481 ntBASIC17.87■□□□□ 0.45
KRT2P35908 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
KRT2P35908 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT2P35908 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.87■□□□□ 0.45
KRT2P35908 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.87■□□□□ 0.45
KRT2P35908 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
KRT2P35908 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT2P35908 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
KRT2P35908 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT2P35908 DBET-201ENST00000630918 3363 ntBASIC17.86■□□□□ 0.45
KRT2P35908 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
KRT2P35908 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT2P35908 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.86■□□□□ 0.45
KRT2P35908 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT2P35908 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 DOC2GP-202ENST00000514950 1163 ntBASIC17.86■□□□□ 0.45
KRT2P35908 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT2P35908 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
KRT2P35908 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
KRT2P35908 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT2P35908 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.86■□□□□ 0.45
KRT2P35908 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
KRT2P35908 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.86■□□□□ 0.45
KRT2P35908 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KRT2P35908 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms