Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.56□□□□□ -0.56
CKS2P33552 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.56□□□□□ -0.56
CKS2P33552 AC092329.2-201ENST00000598402 547 ntBASIC11.56□□□□□ -0.56
CKS2P33552 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS2P33552 AL805961.1-202ENST00000641562 540 ntBASIC11.56□□□□□ -0.56
CKS2P33552 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS2P33552 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.56□□□□□ -0.56
CKS2P33552 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.56□□□□□ -0.56
CKS2P33552 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CKS2P33552 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
CKS2P33552 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CKS2P33552 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 BEND3P1-201ENST00000421591 1944 ntBASIC11.55□□□□□ -0.56
CKS2P33552 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 NUS1P2-201ENST00000417358 873 ntBASIC11.55□□□□□ -0.56
CKS2P33552 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 FAM8A3P-201ENST00000427218 844 ntBASIC11.55□□□□□ -0.56
CKS2P33552 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.55□□□□□ -0.56
CKS2P33552 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 AC022616.7-201ENST00000525383 220 ntBASIC11.55□□□□□ -0.56
CKS2P33552 AP002469.2-201ENST00000531724 424 ntBASIC11.55□□□□□ -0.56
CKS2P33552 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CKS2P33552 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CKS2P33552 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.55□□□□□ -0.56
CKS2P33552 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CKS2P33552 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms