Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SDHBP21912 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 AC011742.3-201ENST00000439053 820 ntBASIC15.3■□□□□ 0.04
SDHBP21912 AC098935.1-201ENST00000446057 611 ntBASIC15.3■□□□□ 0.04
SDHBP21912 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.3■□□□□ 0.04
SDHBP21912 TUBBP5-203ENST00000508529 1334 ntBASIC15.3■□□□□ 0.04
SDHBP21912 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.3■□□□□ 0.04
SDHBP21912 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.3■□□□□ 0.04
SDHBP21912 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SDHBP21912 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SDHBP21912 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SDHBP21912 AC244157.2-201ENST00000616239 1006 ntBASIC15.3■□□□□ 0.04
SDHBP21912 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SDHBP21912 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 AC092850.2-201ENST00000623821 2697 ntBASIC15.3■□□□□ 0.04
SDHBP21912 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SDHBP21912 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SDHBP21912 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SDHBP21912 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 AL136982.4-201ENST00000437689 1740 ntBASIC15.29■□□□□ 0.04
SDHBP21912 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHBP21912 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHBP21912 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHBP21912 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.29■□□□□ 0.04
SDHBP21912 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.29■□□□□ 0.04
SDHBP21912 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.29■□□□□ 0.04
SDHBP21912 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 PCDHB17P-201ENST00000539533 2393 ntBASIC15.29■□□□□ 0.04
SDHBP21912 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHBP21912 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.29■□□□□ 0.04
SDHBP21912 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.29■□□□□ 0.04
SDHBP21912 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.29■□□□□ 0.04
SDHBP21912 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHBP21912 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHBP21912 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SDHBP21912 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 AP002414.2-201ENST00000591780 3365 ntBASIC15.28■□□□□ 0.04
SDHBP21912 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SDHBP21912 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.28■□□□□ 0.04
SDHBP21912 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.28■□□□□ 0.04
SDHBP21912 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SDHBP21912 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
SDHBP21912 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.28■□□□□ 0.04
SDHBP21912 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SDHBP21912 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHBP21912 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SDHBP21912 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.28■□□□□ 0.04
SDHBP21912 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.28■□□□□ 0.04
SDHBP21912 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.28■□□□□ 0.04
SDHBP21912 AC234782.1-201ENST00000451950 919 ntBASIC15.28■□□□□ 0.04
SDHBP21912 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.28■□□□□ 0.04
SDHBP21912 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.28■□□□□ 0.04
SDHBP21912 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.28■□□□□ 0.04
SDHBP21912 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.28■□□□□ 0.04
SDHBP21912 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
SDHBP21912 AC005357.2-202ENST00000590507 1060 ntBASIC15.28■□□□□ 0.04
SDHBP21912 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.28■□□□□ 0.04
SDHBP21912 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SDHBP21912 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms