Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
THRAP10827 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THRAP10827 PCDHA3-202ENST00000532566 4594 ntBASIC15.75■□□□□ 0.11
THRAP10827 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
THRAP10827 CETN4P-206ENST00000642099 2168 ntBASIC15.75■□□□□ 0.11
THRAP10827 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.75■□□□□ 0.11
THRAP10827 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.75■□□□□ 0.11
THRAP10827 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.74■□□□□ 0.11
THRAP10827 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.74■□□□□ 0.11
THRAP10827 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.74■□□□□ 0.11
THRAP10827 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.74■□□□□ 0.11
THRAP10827 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 MTND6P24-201ENST00000440466 518 ntBASIC15.74■□□□□ 0.11
THRAP10827 CRB3P1-201ENST00000449338 276 ntBASIC15.74■□□□□ 0.11
THRAP10827 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.74■□□□□ 0.11
THRAP10827 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 BANF1P1-201ENST00000553684 263 ntBASIC15.74■□□□□ 0.11
THRAP10827 AC005225.4-201ENST00000557330 545 ntBASIC15.74■□□□□ 0.11
THRAP10827 AC105021.1-202ENST00000570572 669 ntBASIC15.74■□□□□ 0.11
THRAP10827 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 RN7SL828P-201ENST00000607615 303 ntBASIC15.74■□□□□ 0.11
THRAP10827 TEX28P1-201ENST00000613479 1221 ntBASIC15.74■□□□□ 0.11
THRAP10827 TEX28P2-201ENST00000617764 1221 ntBASIC15.74■□□□□ 0.11
THRAP10827 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.74■□□□□ 0.11
THRAP10827 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.74■□□□□ 0.11
THRAP10827 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
THRAP10827 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.73■□□□□ 0.11
THRAP10827 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.73■□□□□ 0.11
THRAP10827 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
THRAP10827 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
THRAP10827 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.73■□□□□ 0.11
THRAP10827 AC005034.1-201ENST00000426657 489 ntBASIC15.73■□□□□ 0.11
THRAP10827 AC009477.1-201ENST00000452936 217 ntBASIC15.73■□□□□ 0.11
THRAP10827 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
THRAP10827 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.73■□□□□ 0.11
THRAP10827 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
THRAP10827 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.73■□□□□ 0.11
THRAP10827 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.73■□□□□ 0.11
THRAP10827 AL589739.1-201ENST00000607720 493 ntBASIC15.73■□□□□ 0.11
THRAP10827 AL035252.4-201ENST00000624174 288 ntBASIC15.73■□□□□ 0.11
THRAP10827 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.73■□□□□ 0.11
THRAP10827 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.73■□□□□ 0.11
THRAP10827 SNX18-202ENST00000343017 3140 ntBASIC15.73■□□□□ 0.11
THRAP10827 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.73■□□□□ 0.11
THRAP10827 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.73■□□□□ 0.11
THRAP10827 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
THRAP10827 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.73■□□□□ 0.11
THRAP10827 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.73■□□□□ 0.11
THRAP10827 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
THRAP10827 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
THRAP10827 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms