Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.41■□□□□ 0.22
RARAP10276 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.41■□□□□ 0.22
RARAP10276 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.4■□□□□ 0.22
RARAP10276 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.4■□□□□ 0.22
RARAP10276 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RARAP10276 CNN2P2-201ENST00000443536 909 ntBASIC16.4■□□□□ 0.22
RARAP10276 CNN2P3-201ENST00000450201 906 ntBASIC16.4■□□□□ 0.22
RARAP10276 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 AC025678.2-201ENST00000562061 970 ntBASIC16.4■□□□□ 0.22
RARAP10276 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.4■□□□□ 0.22
RARAP10276 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 SPDYE12P-201ENST00000618416 771 ntBASIC16.4■□□□□ 0.22
RARAP10276 AL136317.3-201ENST00000618497 906 ntBASIC16.4■□□□□ 0.22
RARAP10276 MIR6069-201ENST00000620069 79 ntBASIC16.4■□□□□ 0.22
RARAP10276 AL033527.5-202ENST00000641632 1098 ntBASIC16.4■□□□□ 0.22
RARAP10276 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.4■□□□□ 0.22
RARAP10276 AC013726.1-201ENST00000563747 2285 ntBASIC16.4■□□□□ 0.22
RARAP10276 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.4■□□□□ 0.22
RARAP10276 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.4■□□□□ 0.22
RARAP10276 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RARAP10276 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.39■□□□□ 0.22
RARAP10276 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.39■□□□□ 0.22
RARAP10276 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RARAP10276 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RARAP10276 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
RARAP10276 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.39■□□□□ 0.21
RARAP10276 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RARAP10276 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.39■□□□□ 0.21
RARAP10276 AC074338.1-201ENST00000416825 156 ntBASIC16.39■□□□□ 0.21
RARAP10276 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.39■□□□□ 0.21
RARAP10276 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.39■□□□□ 0.21
RARAP10276 HLA-V-204ENST00000476601 1289 ntBASIC16.39■□□□□ 0.21
RARAP10276 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.39■□□□□ 0.21
RARAP10276 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RARAP10276 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.39■□□□□ 0.21
RARAP10276 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.39■□□□□ 0.21
RARAP10276 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.39■□□□□ 0.21
RARAP10276 AL138828.2-201ENST00000615812 383 ntBASIC16.39■□□□□ 0.21
RARAP10276 AC139530.3-201ENST00000620344 690 ntBASIC16.39■□□□□ 0.21
RARAP10276 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.39■□□□□ 0.21
RARAP10276 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RARAP10276 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RARAP10276 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RARAP10276 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.39■□□□□ 0.21
RARAP10276 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms