Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRBV12-3P01733 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
TRBV12-3P01733 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRBV12-3P01733 CLK3P2-201ENST00000427566 1453 ntBASIC12.08□□□□□ -0.48
TRBV12-3P01733 AC007541.1-201ENST00000570282 1469 ntBASIC12.08□□□□□ -0.48
TRBV12-3P01733 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRBV12-3P01733 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.08□□□□□ -0.48
TRBV12-3P01733 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRBV12-3P01733 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.07□□□□□ -0.48
TRBV12-3P01733 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 AL391069.4-201ENST00000609583 481 ntBASIC12.07□□□□□ -0.48
TRBV12-3P01733 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 AC013268.4-201ENST00000637413 2228 ntBASIC12.07□□□□□ -0.48
TRBV12-3P01733 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV12-3P01733 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV12-3P01733 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 AC144831.1-201ENST00000573312 2656 ntBASIC12.06□□□□□ -0.48
TRBV12-3P01733 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV12-3P01733 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 KRT18P43-201ENST00000469825 1281 ntBASIC12.06□□□□□ -0.48
TRBV12-3P01733 TERF1P3-201ENST00000505638 1227 ntBASIC12.06□□□□□ -0.48
TRBV12-3P01733 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.06□□□□□ -0.48
TRBV12-3P01733 AC015910.1-201ENST00000579400 975 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms