Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.99□□□□□ -0.17
ZIC3O60481 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 ACTG1P3-201ENST00000431775 1114 ntBASIC13.99□□□□□ -0.17
ZIC3O60481 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.99□□□□□ -0.17
ZIC3O60481 AC007389.4-201ENST00000454674 793 ntBASIC13.99□□□□□ -0.17
ZIC3O60481 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.99□□□□□ -0.17
ZIC3O60481 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.99□□□□□ -0.17
ZIC3O60481 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.99□□□□□ -0.17
ZIC3O60481 GIMAP3P-201ENST00000495150 836 ntBASIC13.99□□□□□ -0.17
ZIC3O60481 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.99□□□□□ -0.17
ZIC3O60481 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
ZIC3O60481 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.99□□□□□ -0.17
ZIC3O60481 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.99□□□□□ -0.17
ZIC3O60481 CLUHP6-201ENST00000580789 941 ntBASIC13.99□□□□□ -0.17
ZIC3O60481 AC010319.3-201ENST00000597028 470 ntBASIC13.99□□□□□ -0.17
ZIC3O60481 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 AL645728.2-202ENST00000641679 227 ntBASIC13.99□□□□□ -0.17
ZIC3O60481 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ZIC3O60481 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ZIC3O60481 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 AC105917.1-201ENST00000506637 2539 ntBASIC13.99□□□□□ -0.17
ZIC3O60481 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZIC3O60481 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZIC3O60481 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.98□□□□□ -0.17
ZIC3O60481 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.98□□□□□ -0.17
ZIC3O60481 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 AC239800.4-201ENST00000603712 296 ntBASIC13.98□□□□□ -0.17
ZIC3O60481 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.98□□□□□ -0.17
ZIC3O60481 AC005252.2-201ENST00000624630 1141 ntBASIC13.98□□□□□ -0.17
ZIC3O60481 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.98□□□□□ -0.17
ZIC3O60481 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZIC3O60481 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.98□□□□□ -0.17
ZIC3O60481 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZIC3O60481 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms