Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.52■□□□□ 0.4
ACTN4O43707 LINC01115-203ENST00000606068 577 ntBASIC17.52■□□□□ 0.4
ACTN4O43707 AL138828.2-201ENST00000615812 383 ntBASIC17.52■□□□□ 0.4
ACTN4O43707 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 AC013726.1-201ENST00000563747 2285 ntBASIC17.52■□□□□ 0.4
ACTN4O43707 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.52■□□□□ 0.4
ACTN4O43707 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
ACTN4O43707 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ACTN4O43707 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
ACTN4O43707 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ACTN4O43707 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ACTN4O43707 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ACTN4O43707 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.52■□□□□ 0.39
ACTN4O43707 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
ACTN4O43707 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ACTN4O43707 FO538757.1-201ENST00000623083 1397 ntBASIC17.52■□□□□ 0.39
ACTN4O43707 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ACTN4O43707 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
ACTN4O43707 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ACTN4O43707 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.52■□□□□ 0.39
ACTN4O43707 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.52■□□□□ 0.39
ACTN4O43707 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ACTN4O43707 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.52■□□□□ 0.39
ACTN4O43707 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.51■□□□□ 0.39
ACTN4O43707 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.51■□□□□ 0.39
ACTN4O43707 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 SERBP1P3-201ENST00000459980 809 ntBASIC17.51■□□□□ 0.39
ACTN4O43707 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 AC098799.1-201ENST00000504752 800 ntBASIC17.51■□□□□ 0.39
ACTN4O43707 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.51■□□□□ 0.39
ACTN4O43707 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.51■□□□□ 0.39
ACTN4O43707 SNHG9-202ENST00000564014 471 ntBASIC17.51■□□□□ 0.39
ACTN4O43707 AC010336.2-201ENST00000564226 506 ntBASIC17.51■□□□□ 0.39
ACTN4O43707 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 Z92544.3-201ENST00000624747 417 ntBASIC17.51■□□□□ 0.39
ACTN4O43707 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ACTN4O43707 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ACTN4O43707 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ACTN4O43707 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ACTN4O43707 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.5■□□□□ 0.39
ACTN4O43707 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ACTN4O43707 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.5■□□□□ 0.39
ACTN4O43707 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.5■□□□□ 0.39
ACTN4O43707 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.5■□□□□ 0.39
ACTN4O43707 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.5■□□□□ 0.39
ACTN4O43707 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ACTN4O43707 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.5■□□□□ 0.39
ACTN4O43707 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.5■□□□□ 0.39
ACTN4O43707 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.5■□□□□ 0.39
ACTN4O43707 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.5■□□□□ 0.39
ACTN4O43707 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.5■□□□□ 0.39
ACTN4O43707 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ACTN4O43707 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ACTN4O43707 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ACTN4O43707 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.49■□□□□ 0.39
ACTN4O43707 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ACTN4O43707 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ACTN4O43707 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ACTN4O43707 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms