Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP2AO43633 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP2AO43633 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.54■□□□□ 0.4
CHMP2AO43633 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP2AO43633 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP2AO43633 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.54■□□□□ 0.4
CHMP2AO43633 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP2AO43633 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP2AO43633 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP2AO43633 AC000095.1-201ENST00000603208 874 ntBASIC17.54■□□□□ 0.4
CHMP2AO43633 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CHMP2AO43633 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP2AO43633 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP2AO43633 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP2AO43633 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP2AO43633 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHMP2AO43633 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP2AO43633 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CHMP2AO43633 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP2AO43633 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP2AO43633 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP2AO43633 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP2AO43633 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CHMP2AO43633 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP2AO43633 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.53■□□□□ 0.4
CHMP2AO43633 KRT17P7-201ENST00000451704 1104 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.53■□□□□ 0.4
CHMP2AO43633 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CHMP2AO43633 AL359711.2-201ENST00000563105 872 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 AC132938.2-201ENST00000579188 680 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.53■□□□□ 0.4
CHMP2AO43633 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHMP2AO43633 BRI3BPP1-201ENST00000594224 787 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CHMP2AO43633 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHMP2AO43633 AL591163.1-201ENST00000641757 987 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 INTS4P2-202ENST00000614726 2019 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 CU639417.3-201ENST00000624240 1404 ntBASIC17.53■□□□□ 0.4
CHMP2AO43633 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CHMP2AO43633 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP2AO43633 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHMP2AO43633 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP2AO43633 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP2AO43633 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP2AO43633 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP2AO43633 AC105250.1-201ENST00000509378 2057 ntBASIC17.52■□□□□ 0.4
CHMP2AO43633 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP2AO43633 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 NORAD-201ENST00000565493 5339 ntBASIC17.52■□□□□ 0.4
CHMP2AO43633 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHMP2AO43633 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP2AO43633 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP2AO43633 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP2AO43633 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.52■□□□□ 0.4
CHMP2AO43633 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CHMP2AO43633 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CHMP2AO43633 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP2AO43633 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP2AO43633 GAPDHP21-201ENST00000450301 1010 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms