Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SGCEO43556 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.9□□□□□ -0.18
SGCEO43556 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SGCEO43556 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 AC015656.1-201ENST00000624209 3578 ntBASIC13.9□□□□□ -0.18
SGCEO43556 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SGCEO43556 PTENP1-202ENST00000532280 3996 ntBASIC13.9□□□□□ -0.18
SGCEO43556 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.9□□□□□ -0.18
SGCEO43556 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 AZGP1P1-201ENST00000411909 902 ntBASIC13.9□□□□□ -0.18
SGCEO43556 SPDYE17-201ENST00000412399 783 ntBASIC13.9□□□□□ -0.18
SGCEO43556 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.9□□□□□ -0.18
SGCEO43556 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.9□□□□□ -0.18
SGCEO43556 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.9□□□□□ -0.18
SGCEO43556 AC004449.1-201ENST00000564240 433 ntBASIC13.9□□□□□ -0.18
SGCEO43556 MIR4313-201ENST00000580760 101 ntBASIC13.9□□□□□ -0.18
SGCEO43556 AL133215.2-201ENST00000609242 977 ntBASIC13.9□□□□□ -0.18
SGCEO43556 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.9□□□□□ -0.18
SGCEO43556 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SGCEO43556 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SGCEO43556 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SGCEO43556 AC092127.1-201ENST00000567093 3455 ntBASIC13.9□□□□□ -0.18
SGCEO43556 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SGCEO43556 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SGCEO43556 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.9□□□□□ -0.19
SGCEO43556 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SGCEO43556 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SGCEO43556 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SGCEO43556 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 AC020658.6-201ENST00000623564 1870 ntBASIC13.89□□□□□ -0.19
SGCEO43556 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SGCEO43556 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SGCEO43556 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SGCEO43556 FO393414.2-201ENST00000405153 598 ntBASIC13.89□□□□□ -0.19
SGCEO43556 CNN2P2-201ENST00000443536 909 ntBASIC13.89□□□□□ -0.19
SGCEO43556 CNN2P3-201ENST00000450201 906 ntBASIC13.89□□□□□ -0.19
SGCEO43556 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.89□□□□□ -0.19
SGCEO43556 AC109322.1-201ENST00000524499 1264 ntBASIC13.89□□□□□ -0.19
SGCEO43556 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SGCEO43556 AC025678.2-201ENST00000562061 970 ntBASIC13.89□□□□□ -0.19
SGCEO43556 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 AL589739.1-201ENST00000607720 493 ntBASIC13.89□□□□□ -0.19
SGCEO43556 AL136317.3-201ENST00000618497 906 ntBASIC13.89□□□□□ -0.19
SGCEO43556 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.89□□□□□ -0.19
SGCEO43556 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.89□□□□□ -0.19
SGCEO43556 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SGCEO43556 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.89□□□□□ -0.19
SGCEO43556 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 CETN4P-206ENST00000642099 2168 ntBASIC13.89□□□□□ -0.19
SGCEO43556 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SGCEO43556 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SGCEO43556 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms