Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC7O00311 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CDC7O00311 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC7O00311 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC7O00311 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC7O00311 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC7O00311 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC7O00311 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC7O00311 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC7O00311 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC7O00311 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC7O00311 AC010336.2-201ENST00000564226 506 ntBASIC15.34■□□□□ 0.05
CDC7O00311 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.34■□□□□ 0.05
CDC7O00311 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 AC073592.8-201ENST00000624126 511 ntBASIC15.34■□□□□ 0.05
CDC7O00311 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.34■□□□□ 0.05
CDC7O00311 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 PKD1P5-201ENST00000532415 10291 ntBASIC15.34■□□□□ 0.05
CDC7O00311 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 AC063926.3-201ENST00000624734 5658 ntBASIC15.34■□□□□ 0.05
CDC7O00311 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CDC7O00311 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC7O00311 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.34■□□□□ 0.05
CDC7O00311 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 LINC00528-201ENST00000600723 2160 ntBASIC15.34■□□□□ 0.05
CDC7O00311 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.33■□□□□ 0.05
CDC7O00311 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
CDC7O00311 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDC7O00311 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC7O00311 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CDC7O00311 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC7O00311 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.33■□□□□ 0.05
CDC7O00311 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC7O00311 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC7O00311 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CDC7O00311 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CDC7O00311 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CDC7O00311 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC7O00311 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC7O00311 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.33■□□□□ 0.04
CDC7O00311 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 AC069120.2-201ENST00000524091 540 ntBASIC15.33■□□□□ 0.04
CDC7O00311 AC027369.6-201ENST00000525520 931 ntBASIC15.33■□□□□ 0.04
CDC7O00311 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDC7O00311 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.33■□□□□ 0.04
CDC7O00311 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.33■□□□□ 0.04
CDC7O00311 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms