Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MIR4321-201ENST00000592276 80 ntBASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL358472.5-202ENST00000641448 1267 ntBASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AP002414.2-201ENST00000591780 3365 ntBASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL139010.1-201ENST00000454878 894 ntBASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 BANF1P1-201ENST00000553684 263 ntBASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC061975.2-201ENST00000581722 295 ntBASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL133215.2-201ENST00000609242 977 ntBASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL035252.4-201ENST00000624174 288 ntBASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL161772.1-201ENST00000610494 4412 ntBASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC063926.2-201ENST00000623766 1308 ntBASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms