Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DRB4X5D2U9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 MTND6P24-201ENST00000440466 518 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AC025678.2-201ENST00000562061 970 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AL450472.2-201ENST00000603663 1156 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 RN7SL828P-201ENST00000607615 303 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AC006486.2-201ENST00000624246 2199 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AC026748.1-201ENST00000624349 3251 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 PRAL-201ENST00000624952 3286 ntBASIC11.84□□□□□ -0.51
HLA-DRB4X5D2U9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
HLA-DRB4X5D2U9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.83□□□□□ -0.51
HLA-DRB4X5D2U9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
HLA-DRB4X5D2U9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms