Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC022210.1-201ENST00000449856 793 ntBASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AC104640.1-201ENST00000562617 2109 ntBASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.63■□□□□ 0.09
PCDHB1Q9Y5F3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 AC136621.1-201ENST00000624017 2304 ntBASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 AC114501.2-201ENST00000439631 535 ntBASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 TARDBPP1-201ENST00000442013 1203 ntBASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 AC055876.2-201ENST00000531834 546 ntBASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 AC106886.1-201ENST00000568660 600 ntBASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHB1Q9Y5F3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 AL139384.1-201ENST00000612143 3047 ntBASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHB1Q9Y5F3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms