Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 KRT8P12-202ENST00000472924 1397 ntBASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 METTL21AP1-201ENST00000438852 635 ntBASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 MTND6P24-201ENST00000440466 518 ntBASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 KLF2P3-201ENST00000451977 1087 ntBASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 AC051619.7-201ENST00000568314 623 ntBASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 CETN4P-206ENST00000642099 2168 ntBASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAPPC4Q9Y296 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 AC041040.2-201ENST00000622926 2899 ntBASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 AL079307.3-201ENST00000556114 283 ntBASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 AC140878.1-201ENST00000565277 250 ntBASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 AL589739.1-201ENST00000607720 493 ntBASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAPPC4Q9Y296 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms