Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 AL359881.2-201ENST00000602973 570 ntBASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE7Q9UBL6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 ACA64.2-201ENST00000459014 129 ntBASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 TDH-203ENST00000531764 1110 ntBASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 MIR5189-201ENST00000577370 114 ntBASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 AL008721.1-201ENST00000609964 604 ntBASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CPNE7Q9UBL6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 SLC25A47P1-201ENST00000531577 414 ntBASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.13■□□□□ 0.01
CPNE7Q9UBL6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms