Protein–RNA interactions for Protein: Q9P0P0

RNF181, E3 ubiquitin-protein ligase RNF181, humanhuman

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF181Q9P0P0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF181Q9P0P0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 AC018463.1-201ENST00000456674 917 ntBASIC18.47■□□□□ 0.55
RNF181Q9P0P0 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 AP003392.6-201ENST00000607709 325 ntBASIC18.47■□□□□ 0.55
RNF181Q9P0P0 MIR6858-201ENST00000620733 67 ntBASIC18.47■□□□□ 0.55
RNF181Q9P0P0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF181Q9P0P0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 FAM90A2P-201ENST00000511144 1395 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 FAM90A25P-201ENST00000528404 1395 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 AC239868.1-201ENST00000369385 493 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 RN7SL258P-201ENST00000478664 300 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 MIR4313-201ENST00000580760 101 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 RPL17P45-201ENST00000586289 509 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 AC008805.1-201ENST00000590892 364 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 AC004466.1-201ENST00000599515 1080 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 AC022188.1-201ENST00000620960 1664 ntBASIC18.46■□□□□ 0.55
RNF181Q9P0P0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RNF181Q9P0P0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RNF181Q9P0P0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 HLA-J-204ENST00000495278 958 ntBASIC18.45■□□□□ 0.54
RNF181Q9P0P0 MESTP3-201ENST00000503460 968 ntBASIC18.45■□□□□ 0.54
RNF181Q9P0P0 AC026803.1-201ENST00000569130 274 ntBASIC18.45■□□□□ 0.54
RNF181Q9P0P0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF181Q9P0P0 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms