Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 AL031133.1-201ENST00000406807 723 ntBASIC18.66■□□□□ 0.58
RTN4Q9NQC3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 MIR3908-201ENST00000579798 126 ntBASIC18.66■□□□□ 0.58
RTN4Q9NQC3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 AP000867.4-201ENST00000641616 219 ntBASIC18.66■□□□□ 0.58
RTN4Q9NQC3 SLC6A6P1-201ENST00000413933 1850 ntBASIC18.66■□□□□ 0.58
RTN4Q9NQC3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 SIGLEC30P-201ENST00000455569 941 ntBASIC18.65■□□□□ 0.58
RTN4Q9NQC3 LINC01259-201ENST00000507056 757 ntTSL 3 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 BNIP3P18-201ENST00000593976 575 ntBASIC18.65■□□□□ 0.58
RTN4Q9NQC3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 AC005332.1-201ENST00000577698 1310 ntBASIC18.65■□□□□ 0.58
RTN4Q9NQC3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4Q9NQC3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.64■□□□□ 0.58
RTN4Q9NQC3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RTN4Q9NQC3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RTN4Q9NQC3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RTN4Q9NQC3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RTN4Q9NQC3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
RTN4Q9NQC3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RTN4Q9NQC3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RTN4Q9NQC3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 AGAP7P-201ENST00000582299 2062 ntBASIC18.64■□□□□ 0.57
RTN4Q9NQC3 AGAP14-201ENST00000624701 2060 ntBASIC18.64■□□□□ 0.57
RTN4Q9NQC3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 LINC00895-201ENST00000629028 1637 ntBASIC18.64■□□□□ 0.57
RTN4Q9NQC3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 AP002414.1-201ENST00000391405 1147 ntBASIC18.64■□□□□ 0.57
RTN4Q9NQC3 RCN1P2-201ENST00000398357 915 ntBASIC18.64■□□□□ 0.57
RTN4Q9NQC3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.64■□□□□ 0.57
RTN4Q9NQC3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms