Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 RPL5P21-201ENST00000404620 815 ntBASIC15.07■□□□□ 0
LRTM1Q9HBL6 GPS2P2-201ENST00000430745 888 ntBASIC15.07■□□□□ 0
LRTM1Q9HBL6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 LINC01101-201ENST00000622953 1884 ntBASIC15.07■□□□□ 0
LRTM1Q9HBL6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.07■□□□□ 0
LRTM1Q9HBL6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.07■□□□□ 0
LRTM1Q9HBL6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRTM1Q9HBL6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 SPDYE14P-201ENST00000442619 822 ntBASIC15.06■□□□□ 0
LRTM1Q9HBL6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 AC026150.2-201ENST00000564693 1156 ntBASIC15.06■□□□□ 0
LRTM1Q9HBL6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 RN7SL828P-201ENST00000607615 303 ntBASIC15.06■□□□□ 0
LRTM1Q9HBL6 AL133215.2-201ENST00000609242 977 ntBASIC15.06■□□□□ 0
LRTM1Q9HBL6 AC007967.4-201ENST00000614700 386 ntBASIC15.06■□□□□ 0
LRTM1Q9HBL6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 AL035456.1-201ENST00000456064 1369 ntBASIC15.06■□□□□ 0
LRTM1Q9HBL6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.06■□□□□ 0
LRTM1Q9HBL6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
LRTM1Q9HBL6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
LRTM1Q9HBL6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.05■□□□□ 0
LRTM1Q9HBL6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LRTM1Q9HBL6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LRTM1Q9HBL6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LRTM1Q9HBL6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 MTND6P24-201ENST00000440466 518 ntBASIC15.05■□□□□ -0
LRTM1Q9HBL6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.05■□□□□ -0
LRTM1Q9HBL6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms