Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 AC097359.2-201ENST00000604992 2389 ntBASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 MTHFR-210ENST00000641407 2387 ntBASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 AL121723.1-201ENST00000445194 1519 ntBASIC14.31□□□□□ -0.12
RSPO3Q9BXY4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 AC018529.2-202ENST00000611482 3087 ntBASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RSPO3Q9BXY4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 AL133267.1-201ENST00000398220 340 ntBASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 AC044860.1-202ENST00000559481 777 ntBASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms