Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 OR2I1P-210ENST00000642037 4691 ntBASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 AL592424.1-201ENST00000563624 1536 ntBASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 MIR346-201ENST00000362234 95 ntBASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 FAM86GP-201ENST00000448322 971 ntBASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 AC093512.1-201ENST00000617969 520 ntBASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 AP001059.3-201ENST00000619053 235 ntBASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 AC105250.1-201ENST00000509378 2057 ntBASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TUBA1CQ9BQE3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TUBA1CQ9BQE3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TUBA1CQ9BQE3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms