Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 AC011467.4-201ENST00000594891 528 ntBASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 AC004461.2-201ENST00000629517 803 ntBASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 METTL21AP1-201ENST00000438852 635 ntBASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 TIMM17BP1-201ENST00000545713 516 ntBASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 DUX4L27-201ENST00000554796 1261 ntBASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 AC009407.1-201ENST00000568958 598 ntBASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 LINC01101-201ENST00000622953 1884 ntBASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 FAM45BP-202ENST00000592932 1624 ntBASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.24■□□□□ 0.03
PDLIM5Q96HC4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PDLIM5Q96HC4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms